LongevityMap variant

Entry Details

Longevity Association
Non-significant
Population
American (Caucasian and African–American), Ashkenazi Jewish
Study Design
A panel of 477 tag SNPs across 87 candidate genes was screened in >5000 older participants from the population-based Cardiovascular Health Study (CHS). Then, the significant results were validated in Ashkenazi Jews cohort and Study of Osteoporotic Fractures (SOF) cohort.
Conclusions
The minor allele of PARP1 rs1805415 was nominally associated with decreased longevity (P = 0.001) and higher IL-6 concentration. The results were replicated in Ashkenazi Jews cohort (P = 0.04), yet failed in the SOF cohort. A pooled analysis revealed a borderline significant association (P = 0.07). rs1805415 is in strong LD with rs1136410.
Identifier
rs1136410
In Other Studies (IDs)
3107
Cytogenetic Location
1q42.12
UCSC Genome Browser
View 1q42.12 on the UCSC genome browser

Gene details

HGNC symbol
PARP1
Aliases
PARP; PPOL; ADPRT; ARTD1; ADPRT1; PARP-1; ADPRT; 1; pADPRT-1 
Common name
poly(ADP-ribose) polymerase 1 
Description
This gene encodes a chromatin-associated enzyme, poly(ADP-ribosyl)transferase, which modifies various nuclear proteins by poly(ADP-ribosyl)ation. The modification is dependent on DNA and is involved in the regulation of various important cellular processes such as differentiation, proliferation, and tumor transformation and also in the regulation of the molecular events involved in the recovery of cell from DNA damage. In addition, this enzyme may be the site of mutation in Fanconi anemia, and may participate in the pathophysiology of type I diabetes. [provided by RefSeq, Jul 2008]
Other longevity studies of this gene
15
OMIM
173870
Ensembl
ENSG00000143799
UniProt/Swiss-Prot
A0A024R3T8_HUMAN
Entrez Gene
142
UniGene
177766
HapMap
View on HapMap

Homologs in model organisms

Caenorhabditis elegans
parp-1
Danio rerio
parp1
Drosophila melanogaster
Parp
Mus musculus
Parp1
Rattus norvegicus
Parp1

In other databases

GenAge model organism genes
  • A homolog of this gene for Mus musculus is present as Parp1
  • A homolog of this gene for Caenorhabditis elegans is present as pme-1
GenAge human genes
  • This gene is present as PARP1
CellAge
  • This gene is present as PARP1
CellAge gene expression
  • This gene is present as PARP1

References

Walston et al. (2009)

Other variants which are also part of this study