LongevityMap variant

Entry Details

Longevity Association
Significant
Population
Italian
Study Design
A sample of 143 centenarians and a control sample of 158 individuals were examined for polymorphism in APOB restriction fragment length (RFLP) (XbaI2488 and EcoRI4154) and variable number of tandem repeat (VNTR) (3'APOB-VNTR) polymorphisms
Conclusions
Neither the XbaI-RFLP nor the EcoRI-RFLP was able to discriminate between centenarians and controls, while the 3'APOB-VNTR multiallelic system revealed significant differences between the samples: the frequency of alleles with fewer than 35 repeats was lower in centenarians than in controls
Identifier
APOB
In Other Studies (IDs)
2 7
Cytogenetic Location
2p24.1
UCSC Genome Browser
View 2p24.1 on the UCSC genome browser

Gene details

HGNC symbol
APOB
Aliases
FLDB; LDLCQ4; apoB-48; apoB-100 
Common name
apolipoprotein B 
Description
This gene product is the main apolipoprotein of chylomicrons and low density lipoproteins. It occurs in plasma as two main isoforms, apoB-48 and apoB-100: the former is synthesized exclusively in the gut and the latter in the liver. The intestinal and the hepatic forms of apoB are encoded by a single gene from a single, very long mRNA. The two isoforms share a common N-terminal sequence. The shorter apoB-48 protein is produced after RNA editing of the apoB-100 transcript at residue 2180 (CAA->UAA), resulting in the creation of a stop codon, and early translation termination. Mutations in this gene or its regulatory region cause hypobetalipoproteinemia, normotriglyceridemic hypobetalipoproteinemia, and hypercholesterolemia due to ligand-defective apoB, diseases affecting plasma cholesterol and apoB levels. [provided by RefSeq, Jul 2008]
Other longevity studies of this gene
2
OMIM
107730
Ensembl
ENSG00000084674
UniProt/Swiss-Prot
APOB_HUMAN
Entrez Gene
338
UniGene
120759
HapMap
View on HapMap

Homologs in model organisms

Danio rerio
apobb.1
Danio rerio
apobb.2
Danio rerio
apoba
Drosophila melanogaster
Rfabg
Mus musculus
Apob
Rattus norvegicus
Apob

References

De Benedictis et al. (1997)

Other variants which are also part of this study