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Gene name (HAGRID: 0092) | |
| HGNC symbol | ERCC6 |
| Aliases | CKN2; CSB; RAD26 |
| Common name | excision repair cross-complementing rodent repair deficiency, complementation group 6 |
Potential relevance to the human ageing process | |
| Main reason for selection | Entry selected based on evidence linking the gene product to a pathway or mechanism linked to ageing |
| Description | Also known as CSB, ERCC6 is involved in DNA repair and perhaps DNA unwinding [0506]. ERCC6-null mice show skin cancer predisposition, reduced growth, and neurologic dysfunction [1768]. Mice mutant for ERCC6 and XPA die before weaning and display some signs of premature ageing included stunted growth, neurological dysfunction, retinal degeneration, cachexia, and kyphosis [1934]. Mutations in the human ERCC6 gene cause Cockayne syndrome type B, which can be considered a segmental progeroid syndrome even though it is more severe than the Cockayne syndrome type A caused by mutations in ERCC8. If indeed Cockayne syndrome is premature ageing, it is likely ERCC6 plays a role in human ageing [0238]. |
Cytogenetic information | |
| Cytogenetic band | 10q11.23 |
| Location | 50,336,714 bp to 50,417,078 bp |
| Orientation | Minus strand |
Display region using the UCSC Genome Browser | |
Protein information | |
| Function | DNA repair, DNA condensation |
| Cellular location | nucleus |
| Expression | pre natal, CNS, immune system, germ cells, stem cells, other |
| Gene Ontology | GO:0006350; transcription; Process GO:0000166; nucleotide binding; Function |
Protein-protein interactions | |
| Interacting proteins | TP53, ERCC8, PARP1, ERCC5, CHEK2. |
Display interactions using the IGD | |
Retrieve sequences for ERCC6 | |
| ORF | ORF |
| CDS | CDS |
Homologues in model organisms | |
| P. troglodytes | ERCC6 (excision repair cross-complementing rodent repair deficiency, complementation group 6) |
| C. lupus familiaris | ERCC6 (excision repair cross-complementing rodent repair deficiency, complementation group 6) |
| B. taurus | ERCC6 (excision repair cross-complementing rodent repair deficiency, complementation group 6) |
| M. musculus | Ercc6 (excision repair cross-complementing rodent repair deficiency, complementation group 6) |
| R. norvegicus | Ercc6_predicted (excision repair cross-complementing rodent repair deficiency, complementation group 6 (predicted)) |
| G. gallus | ERCC6 (excision repair cross-complementing rodent repair deficiency, complementation group 6) |
| D. rerio | LOC795791 (hypothetical protein LOC795791) |
| D. rerio | LOC560477 (hypothetical LOC560477) |
| S. pombe | rhp26 (SNF2 family helicase Rhp26) |
| S. cerevisiae | RAD26 (Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion) |
| K. lactis | KLLA0E22726g (mRNA gene KLLA0E22726g) |
| E. gossypii | AGOS_AEL065C (AEL065Cp) |
| M. grisea | MGG_05239 (hypothetical protein) |
| N. crassa | NCU07837.1 (hypothetical protein) |
| A. thaliana | CHR8 (CHR8 (chromatin remodeling 8); ATP binding / DNA binding / helicase) |
| O. sativa | Os01g0102800 (hypothetical protein) |
HomoloGene (6279) | |
Selected references | |
[1934] van der Pluijm et al. (2007), Impaired genome maintenance suppresses the growth hormone--insulin-like growth factor 1 axis in mice with Cockayne syndrome, PubMed | |
External links | |
| EPD | |
| ORF Accession | NM_000124 |
| CDS Accession | NP_000115 |
| OMIM | 609413 |
| HPRD | 00596 |
| Ensembl | ERCC6 |
| Swiss-Prot | ERCC6_HUMAN |
| GeneCards | ERCC6 |
| Entrez Gene | 2074 |
| UniGene | |
| GenAtlas | ERCC6 |
| Internet | Search Google |
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